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  5. Tin_g12841

Tin_g12841


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12841

Target Alias Description ECC score Gene Family Method Actions
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.03 OrthoFinder output from all 47 species
Ceric.14G063100.1 Ceric.14G063100 not classified & original description: pacid=50634149... 0.04 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.04 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g32771 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Len_g05348 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17740 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63257 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52993 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 617 656
IPR002885 Pentatricopeptide_repeat 417 464
IPR002885 Pentatricopeptide_repeat 316 362
IPR002885 Pentatricopeptide_repeat 518 562
IPR002885 Pentatricopeptide_repeat 117 143
IPR002885 Pentatricopeptide_repeat 217 247
IPR002885 Pentatricopeptide_repeat 690 712
IPR002885 Pentatricopeptide_repeat 189 211
No external refs found!