Tin_g13475 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13475

Target Alias Description ECC score Gene Family Method Actions
Ala_g24720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35639 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14110 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52462 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13606 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24699 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26356 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26671.t1 LOP1, TRN1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68465.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68470.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15505 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20580 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40231 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08144 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06746 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 594 780
No external refs found!