Aliases : UPL6
Description : E3 ubiquiTin ligase *(UPL6) & original description: none
Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00213880 | UPL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G17205 | UPL6 | ubiquitin protein ligase 6 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04174 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07504 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18052.t1 | UPL6, Aspi01Gene18052 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38315 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G020700.1 | UPL6, Ceric.05G020700 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z062300.1 | UPL7, Ceric.1Z062300 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02012 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10609 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033734001 | UPL7 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034942001 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04194 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g06690.1 | UPL6, LOC_Os05g06690 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436808g0010 | UPL6 | E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g18370.1 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g02100.1 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20140 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13855 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g08375 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005368 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: CDS=254-3667 | 0.02 | OrthoFinder output from all 47 species | |
| Smo443962 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g057900.3.1 | UPL6, Solyc01g057900 | monomeric E3 ubiquitin ligase (HECT) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e012275_P001 | UPL7, Zm00001e012275 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039899_P001 | UPL6, Zm00001e039899 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0022406 | membrane docking | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048278 | vesicle docking | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051640 | organelle localization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140029 | exocytic process | IEP | HCCA |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000569 | HECT_dom | 739 | 1045 |
| No external refs found! |
