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  5. Tin_g13566

Tin_g13566 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13566
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00070p00149100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G35460 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G20180 PIL5, PIF1 phytochrome interacting factor 3-like 5 0.03 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 OrthoFinder output from all 47 species
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 OrthoFinder output from all 47 species
AT5G64980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g042065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053074 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055289 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056069 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08014 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61959 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05211 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13155 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40845 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g29424 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01205.t1 CIB1, Aspi01Gene01205 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14107.t1 Aspi01Gene14107 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14205.t1 Aspi01Gene14205 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46366.t1 HEC2, Aspi01Gene46366 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.04 OrthoFinder output from all 47 species
Cba_g01170 HEC3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26289 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G032200.1 Ceric.11G032200 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.12G021200.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G024600.1 PIL5, PIF1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g20328 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36714 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07694 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12124 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18718 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18466 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009479001 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os03g12940.1 LOC_Os03g12940 transcription factor (bHLH). component FBX of SCF E3... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g30090.1 RHD6, LOC_Os06g30090 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g14229 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19799 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06200 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06729 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37660 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g40022 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
MA_3940g0010 LRL3 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Msp_g24682 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18447 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03844 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19414 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34452 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02825 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013028 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013890 LRL1 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019660 SPT bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g40903 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52771 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo419388 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Zm00001e005554_P001 Zm00001e005554 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e016160_P003 SPT, Zm00001e016160 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e017430_P001 PIF3, POC1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e019392_P001 Zm00001e019392 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 460 507
No external refs found!