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  5. Tin_g13894

Tin_g13894 (KCS1)


Aliases : KCS1

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none


Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13894
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00268740 KCS11,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00218730 KCS10, FDH,... 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00218830 G2, POP1, KCS6,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
AMTR_s00079p00192440 G2, POP1, KCS6,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
AMTR_s00126p00068780 KCS7,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.03 OrthoFinder output from all 47 species
AT1G71160 KCS7 3-ketoacyl-CoA synthase 7 0.04 OrthoFinder output from all 47 species
AT3G52160 KCS15 3-ketoacyl-CoA synthase 15 0.04 OrthoFinder output from all 47 species
AT5G49070 KCS21 3-ketoacyl-CoA synthase 21 0.04 OrthoFinder output from all 47 species
Als_g05041 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06821 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10992 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32874 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07226 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00747 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04445 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37603 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68102 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02098.t1 KCS4, Aspi01Gene02098 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07651.t1 KCS11, Aspi01Gene07651 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56751.t1 KCS4, Aspi01Gene56751 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030519 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1839 0.04 OrthoFinder output from all 47 species
Cba_g05210 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G063100.1 KCS1, Ceric.13G063100 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G044200.1 KCS4, Ceric.39G044200 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g02862 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03962 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11603 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13434 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14441 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43731 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50625 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15087 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16399 HIC, KCS13 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22693 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30267 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30621 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47176 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09927 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15685 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28211 KCS17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022919001 KCS7 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
GSVIVT01026270001 KCS21 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
GSVIVT01027424001 KCS1 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
GSVIVT01034244001 KCS15 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
Gb_05331 KCS10, FDH 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
Gb_15649 KCS9 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Gb_27864 KCS9 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49920.1 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08360.1 KCS10, FDH,... 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28060.1 KCS20, LOC_Os10g28060 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Len_g59310 HIC, KCS13 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428373g0020 KCS11 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_105806g0010 KCS11 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_339700g0010 KCS9 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
MA_8048664g0010 KCS8 3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9089774g0010 KCS8 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g19004 KCS2 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003045 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1632 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013491 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1617 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020692 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1584 0.03 OrthoFinder output from all 47 species
Smo79947 KCS4 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Solyc02g063140.4.1 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
Solyc02g085870.3.1 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Solyc05g013220.2.1 KCS20, Solyc05g013220 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Solyc08g067260.4.1 KCS10, FDH,... 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
Solyc10g009240.3.1 KCS1, Solyc10g009240 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
Spa_g12343 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07216 KCS4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12411 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004773_P001 KCS20, Zm00001e004773 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Zm00001e012803_P001 KCS20, Zm00001e012803 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 417 498
IPR013601 FAE1_typ3_polyketide_synth 115 400
No external refs found!