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  5. Tin_g13967

Tin_g13967


Description : regulatory protein *(SUO) of miRNA biogenesis pathway & original description: none


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13967

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 OrthoFinder output from all 47 species
Adi_g001391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Als_g33736 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g62378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aob_g17691 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aop_g03551 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene40551.t1 Aspi01Gene40551 regulatory protein *(SUO) of miRNA bioGenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70689.t1 Aspi01Gene70689 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g09005 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01009936001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_05084 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42490.1 LOC_Os06g42490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
MA_10432920g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_39143g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g01867 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g15157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g41929 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ppi_g56304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005665 No alias not classified & original description: CDS=481-3921 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018052 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Sam_g04139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g25845 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 344 393
No external refs found!