Tin_g15622


Description : not classified & original description: none


Gene families : OG0001201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001201_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15622
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00020710 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g03343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031099 No alias not classified & original description: CDS=72-1049 0.02 OrthoFinder output from all 47 species
Ceric.17G064000.1 Ceric.17G064000 not classified & original description: pacid=50617307... 0.03 OrthoFinder output from all 47 species
GSVIVT01001172001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_34733 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38894 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g30930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10171923g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10433566g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2226g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!