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  5. Tin_g16789

Tin_g16789 (WRKY56, ATWRKY56)


Aliases : WRKY56, ATWRKY56

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16789
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00181570 WRKY6, ATWRKY6,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00123870 WRKY72,... RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
AMTR_s00078p00145410 ATWRKY50,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AMTR_s00110p00091490 ATWRKY57,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AT1G18860 WRKY61, ATWRKY61 WRKY DNA-binding protein 61 0.04 OrthoFinder output from all 47 species
AT1G62300 WRKY6, ATWRKY6 WRKY family transcription factor 0.04 OrthoFinder output from all 47 species
AT1G69810 WRKY36, ATWRKY36 WRKY DNA-binding protein 36 0.03 OrthoFinder output from all 47 species
AT1G80590 WRKY66, ATWRKY66 WRKY DNA-binding protein 66 0.03 OrthoFinder output from all 47 species
AT2G37260 WRKY44, TTG2,... WRKY family transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT2G44745 No alias WRKY family transcription factor 0.02 OrthoFinder output from all 47 species
AT3G01970 ATWRKY45, WRKY45 WRKY DNA-binding protein 45 0.04 OrthoFinder output from all 47 species
AT4G01720 AtWRKY47, WRKY47 WRKY family transcription factor 0.04 OrthoFinder output from all 47 species
AT5G13080 WRKY75, ATWRKY75 WRKY DNA-binding protein 75 0.04 OrthoFinder output from all 47 species
AT5G46350 WRKY8, ATWRKY8 WRKY DNA-binding protein 8 0.03 OrthoFinder output from all 47 species
Adi_g006856 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029222 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041253 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117328 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117329 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47915 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08045 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21471 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22969 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g42426 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g41346 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26276 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29722 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63033 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23582.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52797.t1 Aspi01Gene52797 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52797.t3 Aspi01Gene52797 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52813.t2 Aspi01Gene52813 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52849.t1 Aspi01Gene52849 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52849.t2 Aspi01Gene52849 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60875.t1 WRKY3, Aspi01Gene60875 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61067.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64693.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65373.t1 WRKY26, Aspi01Gene65373 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene70445.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19526 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22410 WRKY3 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36931 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g42568 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G003100.1 WRKY31,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G026500.1 Ceric.29G026500 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g27869 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28011 ATWRKY30, WRKY30 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33224 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39078 ATWRKY51, WRKY51 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44250 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01345 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012196001 ATWRKY57, WRKY57 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01020060001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01021397001 WRKY28, ATWRKY28 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01032661001 ATWRKY70, WRKY70 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01034148001 WRKY49, ATWRKY49 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01037686001 WRKY6, ATWRKY6 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
Gb_01873 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_02625 WRKY75, ATWRKY75 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_05024 No alias transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_40257 ATWRKY71, WRKY71 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g18584.1 AtWRKY47,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os01g43650.1 WRKY28,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g47560.1 ATWRKY71,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g60490.1 WRKY62,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
LOC_Os01g60540.1 WRKY62,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os02g53100.1 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
LOC_Os03g45450.1 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39720.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
LOC_Os05g40060.1 WRKY54,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os05g40080.1 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os06g06360.1 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44010.1 WRKY18,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02060.1 ATWRKY57,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os09g25060.1 ATWRKY40,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os09g25070.1 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os11g29870.1 WRKY75,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Len_g11805 ATWRKY30, WRKY30 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_101135g0010 No alias transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_10426942g0010 ATWRKY24, WRKY24 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_306130g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_54954g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_88437g0010 WRKY6, ATWRKY6 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_892467g0010 WRKY72, ATWRKY72 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Mp3g17660.1 WRKY42, AtWRKY42 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Mp4g00200.1 WRKY6, ATWRKY6 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g19074 ATWRKY51, WRKY51 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36602 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01052 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05882 WRKY4 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28115 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g36467 WRKY55, ATWRKY55 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59259 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60014 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05849 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09678 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g19052 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071130.4.1 ATWRKY71,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc02g080890.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc02g094270.2.1 WRKY75,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc04g051690.4.1 ATWRKY51,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Solyc05g015850.4.1 WRKY75,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc05g050340.4.1 WRKY55,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc05g055750.3.1 MSP3, ATWRKY34,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc07g056280.3.1 ATWRKY71,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Solyc08g067360.3.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc10g005680.2.1 WRKY2, ATWRKY2,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc12g056750.3.1 ATWRKY51,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Spa_g05540 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16109 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22896 ABO3, WRKY63, ATWRKY63 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26807 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31202 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g34702 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19874 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005219_P001 WRKY1, ZAP1,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e015980_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e016622_P001 ATWRKY50,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e017439_P001 AtWRKY47,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e020279_P001 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027804_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e029092_P002 ATWRKY24,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e029445_P001 WRKY3, Zm00001e029445 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e031518_P004 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Zm00001e031901_P001 WRKY33,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e036514_P001 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e040369_P001 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 142 198
No external refs found!