Tin_g16927


Description : not classified & original description: none


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16927

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032842001 No alias Protein yippee-like OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Ore_g00507 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019959 No alias not classified & original description: CDS=59-427 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 49 141
No external refs found!