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  5. Tin_g17338

Tin_g17338


Description : metabolite transporter *(DTX) & original description: none


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17338

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00178100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
AMTR_s00059p00185260 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AT1G23300 No alias MATE efflux family protein 0.02 OrthoFinder output from all 47 species
AT3G59030 TT12, ATTT12 MATE efflux family protein 0.01 OrthoFinder output from all 47 species
AT4G21903 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Aev_g13724 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01144.t1 Aspi01Gene01144 metabolite transporter *(DTX) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01145.t1 Aspi01Gene01145 metabolite transporter *(DTX) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01145.t2 Aspi01Gene01145 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28624.t1 Aspi01Gene28624 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G079800.1 Ceric.02G079800 metabolite transporter *(DTX) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.28G031400.1 Ceric.28G031400 metabolite transporter *(DTX) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g17055 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030589001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
LOC_Os02g57580.1 LOC_Os02g57580 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os07g01750.1 LOC_Os07g01750 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43654.1 LOC_Os08g43654 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
LOC_Os12g42130.1 TT12, ATTT12,... metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Len_g57573 No alias metabolite transporter *(DTX) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g04109 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37677 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007255 No alias metabolite transporter *(DTX) & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g19393 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g013470.4.1 Solyc05g013470 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Solyc12g006360.3.1 TT12, ATTT12,... metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Tin_g15034 No alias metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002597_P001 Zm00001e002597 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e004873_P001 Zm00001e004873 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e020141_P001 Zm00001e020141 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e022499_P002 Zm00001e022499 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 1 98
No external refs found!