Tin_g17585


Description : not classified & original description: none


Gene families : OG0000010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17585

Target Alias Description ECC score Gene Family Method Actions
Adi_g103016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g61285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22176.t1 Aspi01Gene22176 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36133.t1 Aspi01Gene36133 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38610.t1 Aspi01Gene38610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44952.t1 Aspi01Gene44952 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51771.t1 Aspi01Gene51771 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G002000.1 Ceric.10G002000 not classified & original description: pacid=50612873... 0.03 OrthoFinder output from all 47 species
Ceric.33G041500.1 Ceric.33G041500 not classified & original description: pacid=50606840... 0.02 OrthoFinder output from all 47 species
Dac_g06559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032048 cardiolipin metabolic process IEP HCCA
BP GO:0032049 cardiolipin biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!