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  5. Tin_g17596

Tin_g17596


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17596

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
AT4G12040 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g085857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08393.t1 Aspi01Gene08393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G033600.1 Ceric.35G033600 not classified & original description: pacid=50581057... 0.03 OrthoFinder output from all 47 species
Cre09.g400100 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Dac_g09022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7224g0020 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Pir_g07907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009590.1.1 Solyc09g009590 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g05140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 152 189
IPR002653 Znf_A20 58 81
No external refs found!