Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036674 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069020 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55265 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07402 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27846 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70862 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0652.g081079 | No alias | not classified & original description: CDS=1-2169 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18565 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G034300.1 | VAC1, ECB2,... | not classified & original description: pacid=50630708... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G055500.1 | Ceric.07G055500 | not classified & original description: pacid=50626722... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G009800.1 | Ceric.11G009800 | not classified & original description: pacid=50594985... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.12G060700.1 | Ceric.12G060700 | not classified & original description: pacid=50600993... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G062600.1 | Ceric.21G062600 | not classified & original description: pacid=50603664... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g04615 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18761 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18777 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22537 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24639 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g28766 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35991 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06446 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08317 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16948 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37399 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50046 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g12887 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28521 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g50404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g72049.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11824 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07538 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32049 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38628 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43122 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03426 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06978 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11772 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13015 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13601 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57349 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g45354 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0172.g024419 | No alias | not classified & original description: CDS=1-2448 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25057 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45256 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49732 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 255 | 302 |
| IPR002885 | Pentatricopeptide_repeat | 459 | 506 |
| IPR002885 | Pentatricopeptide_repeat | 50 | 97 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 199 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 403 |
| IPR002885 | Pentatricopeptide_repeat | 25 | 49 |
| IPR002885 | Pentatricopeptide_repeat | 534 | 557 |
| No external refs found! |
