Tin_g17792


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g17792

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g003784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g035633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18707 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28404 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g63625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68766.t1 Aspi01Gene68766 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.05 OrthoFinder output from all 47 species
Ceric.17G003100.1 Ceric.17G003100 not classified & original description: pacid=50617164... 0.03 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.03 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.03 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.05 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.04 OrthoFinder output from all 47 species
Ceric.32G048400.1 Ceric.32G048400 not classified & original description: pacid=50598667... 0.04 OrthoFinder output from all 47 species
Dac_g04996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21618 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30413 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g35265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40077 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.05 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g07188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.05 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19554 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22924 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g29094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g30179 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38614 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g45901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46059 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48395 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06747 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07991 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15250 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20604 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27821 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09876 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39566 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10306 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61912 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12723 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g29768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.03 OrthoFinder output from all 47 species
Sam_g12246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108652 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo74749 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.06 OrthoFinder output from all 47 species
Spa_g01238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15589 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16587 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20183 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g20454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23962 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25989 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47250 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g47874 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g45439 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 98 120
No external refs found!