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  5. Tin_g18192

Tin_g18192


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g18192
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30349 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09512 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55873 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68850.t1 Aspi01Gene68850 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.04 OrthoFinder output from all 47 species
Len_g43213 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50689 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24818 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_460451g0010 No alias no description available(sp|q9slp4|chit1_tulsb : 308.0) 0.02 OrthoFinder output from all 47 species
Nbi_g36424 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30590 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27313 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.03 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 33 75
IPR018392 LysM_dom 93 135
IPR001223 Glyco_hydro18_cat 220 352
No external refs found!