Tin_g18787 (ATCSLD5, CSLD5, SOS6)

Aliases : ATCSLD5, CSLD5, SOS6

Description : not classified & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g18787
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
Aop_g03236	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene62557.t1	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62558.t1	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01021248001	CESA8, LEW2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01023643001	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01028402001	CESA4, NWS2, IRX5	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01030458001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Gb_07444	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os01g54620.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os07g36700.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.05	OrthoFinder output from all 47 species
LOC_Os07g36750.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25490.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os10g32980.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
MA_264460g0010	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Ore_g37613	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e018517_P001	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	25	92

External Links

No external refs found!

Tin_g18787 (ATCSLD5, CSLD5, SOS6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation