Tin_g18930 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g18930

Target Alias Description ECC score Gene Family Method Actions
Adi_g004435 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g035533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007452 No alias not classified & original description: CDS=1-2322 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016963 No alias not classified & original description: CDS=1-2211 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018718 CRR2 not classified & original description: CDS=1-1452 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0263.g026918 No alias not classified & original description: CDS=151-2130 0.05 OrthoFinder output from all 47 species
Spa_g26166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 417 476
IPR002885 Pentatricopeptide_repeat 367 393
IPR002885 Pentatricopeptide_repeat 266 290
IPR002885 Pentatricopeptide_repeat 294 324
IPR002885 Pentatricopeptide_repeat 190 237
IPR046848 E_motif 511 572
No external refs found!