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  5. Tin_g18946

Tin_g18946


Description : not classified & original description: none


Gene families : OG0002035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g18946
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00217960 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 14,... 0.05 OrthoFinder output from all 47 species
AT4G27700 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g020179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04512 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g08691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00617 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Als_g17414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g48949 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0047.g030254 No alias not classified & original description: CDS=115-861 0.04 OrthoFinder output from all 47 species
Azfi_s0111.g045719 No alias not classified & original description: CDS=154-1014 0.05 OrthoFinder output from all 47 species
Cba_g10850 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.03G047500.1 Ceric.03G047500 not classified & original description: pacid=50572810... 0.08 OrthoFinder output from all 47 species
Ceric.11G085200.1 Ceric.11G085200 not classified & original description: pacid=50595665... 0.04 OrthoFinder output from all 47 species
Cre04.g217910 No alias Rhodanese-like domain-containing protein 14,... 0.02 OrthoFinder output from all 47 species
Cre16.g650050 No alias Rhodanese-like domain-containing protein 14,... 0.03 OrthoFinder output from all 47 species
Dac_g39012 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g08099 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18914 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g09713 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01038606001 No alias Rhodanese-like domain-containing protein 14,... 0.08 OrthoFinder output from all 47 species
Gb_06964 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_06965 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g36040.1 LOC_Os09g36040 Rhodanese-like domain-containing protein 14,... 0.04 OrthoFinder output from all 47 species
Len_g48931 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g22281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp3g12160.1 No alias Rhodanese-like domain-containing protein 14,... 0.02 OrthoFinder output from all 47 species
Mp6g02370.1 No alias Rhodanese-like domain-containing protein 14,... 0.03 OrthoFinder output from all 47 species
Msp_g05793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12006 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g02721 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Ore_g01836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35161 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g64617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14984 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g14985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g38865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo174737 No alias Rhodanese-like domain-containing protein 14,... 0.07 OrthoFinder output from all 47 species
Solyc06g053140.3.1 Solyc06g053140 Rhodanese-like domain-containing protein 14,... 0.03 OrthoFinder output from all 47 species
Spa_g17716 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 165 312
No external refs found!