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  5. Tin_g20025

Tin_g20025


Description : not classified & original description: none


Gene families : OG0000576 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20025
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cba_g17179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G005800.1 Ceric.01G005800 not classified & original description: pacid=50590482... 0.04 OrthoFinder output from all 47 species
Ceric.01G062200.1 Ceric.01G062200 not classified & original description: pacid=50591261... 0.04 OrthoFinder output from all 47 species
Ceric.04G060300.1 Ceric.04G060300 not classified & original description: pacid=50630914... 0.02 OrthoFinder output from all 47 species
Ceric.07G009800.1 Ceric.07G009800 not classified & original description: pacid=50626085... 0.03 OrthoFinder output from all 47 species
Ceric.07G050500.1 Ceric.07G050500 not classified & original description: pacid=50627666... 0.03 OrthoFinder output from all 47 species
Ceric.07G083200.1 Ceric.07G083200 not classified & original description: pacid=50626565... 0.04 OrthoFinder output from all 47 species
Ceric.13G097500.1 Ceric.13G097500 not classified & original description: pacid=50635286... 0.02 OrthoFinder output from all 47 species
Ceric.15G038300.1 Ceric.15G038300 not classified & original description: pacid=50640562... 0.02 OrthoFinder output from all 47 species
Ceric.17G004800.1 Ceric.17G004800 not classified & original description: pacid=50617306... 0.02 OrthoFinder output from all 47 species
Ceric.1Z219400.1 Ceric.1Z219400 not classified & original description: pacid=50628354... 0.04 OrthoFinder output from all 47 species
Ceric.20G040600.1 Ceric.20G040600 not classified & original description: pacid=50566052... 0.02 OrthoFinder output from all 47 species
Ceric.20G069200.1 Ceric.20G069200 not classified & original description: pacid=50566465... 0.03 OrthoFinder output from all 47 species
Ceric.21G045400.1 Ceric.21G045400 not classified & original description: pacid=50603870... 0.03 OrthoFinder output from all 47 species
Ceric.23G062000.1 Ceric.23G062000 not classified & original description: pacid=50609731... 0.05 OrthoFinder output from all 47 species
Ceric.24G004700.1 Ceric.24G004700 not classified & original description: pacid=50629060... 0.04 OrthoFinder output from all 47 species
Ceric.25G055500.1 Ceric.25G055500 not classified & original description: pacid=50594639... 0.03 OrthoFinder output from all 47 species
Ceric.28G021500.1 Ceric.28G021500 not classified & original description: pacid=50570449... 0.03 OrthoFinder output from all 47 species
Ceric.29G024700.1 Ceric.29G024700 not classified & original description: pacid=50625225... 0.03 OrthoFinder output from all 47 species
Ceric.29G084100.1 Ceric.29G084100 not classified & original description: pacid=50624626... 0.02 OrthoFinder output from all 47 species
Ceric.31G003000.1 Ceric.31G003000 not classified & original description: pacid=50574259... 0.02 OrthoFinder output from all 47 species
Ceric.31G069300.1 Ceric.31G069300 not classified & original description: pacid=50573908... 0.02 OrthoFinder output from all 47 species
Ceric.32G064700.1 Ceric.32G064700 not classified & original description: pacid=50597932... 0.02 OrthoFinder output from all 47 species
Ceric.33G010400.1 Ceric.33G010400 not classified & original description: pacid=50607467... 0.02 OrthoFinder output from all 47 species
Ceric.33G013100.1 Ceric.33G013100 not classified & original description: pacid=50606971... 0.03 OrthoFinder output from all 47 species
Ceric.33G018100.1 Ceric.33G018100 not classified & original description: pacid=50607624... 0.02 OrthoFinder output from all 47 species
Ceric.34G016600.1 Ceric.34G016600 not classified & original description: pacid=50624033... 0.04 OrthoFinder output from all 47 species
Ceric.34G016700.1 Ceric.34G016700 not classified & original description: pacid=50623874... 0.03 OrthoFinder output from all 47 species
Ceric.34G030100.1 Ceric.34G030100 not classified & original description: pacid=50624034... 0.02 OrthoFinder output from all 47 species
Ceric.34G052500.1 Ceric.34G052500 not classified & original description: pacid=50622665... 0.05 OrthoFinder output from all 47 species
Ceric.36G013500.1 Ceric.36G013500 not classified & original description: pacid=50568287... 0.02 OrthoFinder output from all 47 species
Ceric.36G059500.1 Ceric.36G059500 not classified & original description: pacid=50569136... 0.02 OrthoFinder output from all 47 species
Ceric.39G028200.1 Ceric.39G028200 not classified & original description: pacid=50583499... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 268 332
No external refs found!