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  5. Tin_g20619

Tin_g20619


Description : not classified & original description: none


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20619

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00027180 evm_27.TU.AmTr_v1... Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre01.g009900 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.03 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_36818 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g45350.1 LOC_Os05g45350 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g01647 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13780 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 122 184
No external refs found!