Aliases : ATL2, TL2
Description : RING-H2-class ATL-subclass E3 ubiquiTin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00271850 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00211560 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00056p00124480 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G04360 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G35330 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G01150 | RHA2B | RING-H2 finger protein 2B | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35000 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G42350 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G60966 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | OrthoFinder output from all 47 species | |
| AT5G10380 | ATRING1, RING1 | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g051114 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g15196 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g24713 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g01280 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g09797 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g12649 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g28428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01755 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16135 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g22041 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g26562 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g57707 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene12542.t1 | Aspi01Gene12542 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene37200.t1 | Aspi01Gene37200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene37667.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene43910.t1 | Aspi01Gene43910 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46827.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65265.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014251 | ATL2, TL2 | not classified & original description: CDS=1-1224 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G113600.1 | ATL5, Ceric.01G113600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G057400.1 | Ceric.07G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083800.1 | Ceric.09G083800 | not classified & original description: pacid=50587862... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G018700.1 | Ceric.10G018700 | not classified & original description: pacid=50612549... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G062900.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G075200.1 | Ceric.13G075200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G057500.1 | Ceric.18G057500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G061400.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G061700.1 | Ceric.22G061700 | not classified & original description: pacid=50614963... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G062000.1 | Ceric.22G062000 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.25G065700.1 | Ceric.25G065700 | not classified & original description: pacid=50593844... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G079800.1 | Ceric.29G079800 | not classified & original description: pacid=50625628... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.35G023500.1 | Ceric.35G023500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G022800.1 | Ceric.36G022800 | not classified & original description: pacid=50568753... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G023100.1 | Ceric.36G023100 | not classified & original description: pacid=50568780... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g11553 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16302 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05475 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40176 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g40181 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25304 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06688 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22611 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26130 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012018001 | XERICO | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027524001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037142001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01038717001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_04643 | No alias | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04644 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04645 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05381 | No alias | RHA2 signal transducer of abscisic acid perception | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14788 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28973 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28980 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40644 | BRH1 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g36330.1 | LOC_Os02g36330 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g44700.1 | LOC_Os02g44700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g45390.1 | LOC_Os02g45390 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g44636.1 | LOC_Os03g44636 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g37740.1 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g15170.1 | ATL63, TL63,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g44950.1 | LOC_Os08g44950 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g42530.1 | RHA3B, LOC_Os12g42530 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44401 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57067 | ATL4H | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59507 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g31335 | ATRING1, RING1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_101154g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_10426834g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_177673g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_227897g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_43543g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_68992g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g19472 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28489 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06664 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28091 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02738 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g09527 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12248 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0146.g023101 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01312 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g25475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g095810.3.1 | Solyc01g095810 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g083460.3.1 | Solyc03g083460 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114090.1.1 | Solyc03g114090 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114190.1.1 | Solyc03g114190 | RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g123690.1.1 | Solyc03g123690 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g010330.3.1 | Solyc11g010330 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g087860.3.1 | ATL6, Solyc12g087860 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01259 | BRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10479 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16818 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29314 | BRH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g39129 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39301 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g42431 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04973 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16305 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20441 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007208_P002 | Zm00001e007208 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008020_P001 | Zm00001e008020 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022781_P001 | Zm00001e022781 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 121 | 164 |
| No external refs found! |
