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  5. Tin_g21279

Tin_g21279 (RR12, ARR12)


Aliases : RR12, ARR12

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21279
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT4G16110 RR2, ARR2 response regulator 2 0.04 OrthoFinder output from all 47 species
Adi_g114954 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07223 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30687.t1 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15501 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08589 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20473 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Ppi_g01350 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39543 No alias subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g19078 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 194 244
IPR001789 Sig_transdc_resp-reg_receiver 25 133
No external refs found!