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  5. Tin_g21787

Tin_g21787 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21787

Target Alias Description ECC score Gene Family Method Actions
Aev_g05451 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24176 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57136 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22403.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49654.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026266 ATWBC11, ABCG11,... not classified & original description: CDS=1-1830 0.02 OrthoFinder output from all 47 species
Azfi_s0123.g048394 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=209-2359 0.05 OrthoFinder output from all 47 species
Azfi_s0296.g063538 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=746-2245 0.02 OrthoFinder output from all 47 species
Ceric.21G046300.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G038400.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g06946 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19107 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25067 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g42494 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Gb_16311 No alias ABC transporter G family member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp2g16700.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp4g11430.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g26499 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29286 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g45722 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24075 No alias subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Smo171321 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo231246 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Solyc03g019760.4.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 340 549
IPR043926 ABCG_dom 217 278
IPR003439 ABC_transporter-like_ATP-bd 37 188
No external refs found!