1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g21929

Tin_g21929


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21929

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02380 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g16037 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g06520 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33092.t1 Aspi01Gene33092 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34133.t1 Aspi01Gene34133 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36332.t2 Aspi01Gene36332 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39079.t1 Aspi01Gene39079 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57232.t1 Aspi01Gene57232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001067 EMB2758 not classified & original description: CDS=1-1968 0.06 OrthoFinder output from all 47 species
Azfi_s0042.g026907 No alias not classified & original description: CDS=1-447 0.04 OrthoFinder output from all 47 species
Azfi_s0120.g046799 No alias not classified & original description: CDS=1-2385 0.06 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.06 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.05 OrthoFinder output from all 47 species
Azfi_s0544.g076393 No alias not classified & original description: CDS=1-927 0.05 OrthoFinder output from all 47 species
Cba_g05884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75109 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.05 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.05 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.05 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.05 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42987 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38590 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g49996 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g12346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28225 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g36368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os10g30760.1 LOC_Os10g30760 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Len_g03900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37643 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g28112 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63838 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010995 No alias not classified & original description: CDS=1-2412 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.02 OrthoFinder output from all 47 species
Solyc01g102690.4.1 Solyc01g102690 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
Spa_g32545 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 343
IPR002885 Pentatricopeptide_repeat 346 376
IPR002885 Pentatricopeptide_repeat 823 844
IPR002885 Pentatricopeptide_repeat 210 236
IPR002885 Pentatricopeptide_repeat 444 492
IPR002885 Pentatricopeptide_repeat 546 593
IPR002885 Pentatricopeptide_repeat 652 694
IPR002885 Pentatricopeptide_repeat 243 290
IPR002885 Pentatricopeptide_repeat 746 794
No external refs found!