Tin_g23095


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23095

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17031 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g19946 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71861.t1 CRR2, Aspi01Gene71861 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.01 OrthoFinder output from all 47 species
Azfi_s0059.g034605 No alias ssDNA-binding protein *(OSB) & original description: CDS=21-2777 0.03 OrthoFinder output from all 47 species
Cba_g04060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g33383 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34432 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.02 OrthoFinder output from all 47 species
Ceric.02G010800.1 Ceric.02G010800 not classified & original description: pacid=50584420... 0.03 OrthoFinder output from all 47 species
Ceric.06G022800.1 Ceric.06G022800 not classified & original description: pacid=50620328... 0.02 OrthoFinder output from all 47 species
Ceric.07G053200.1 Ceric.07G053200 not classified & original description: pacid=50626825... 0.06 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.03 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.02 OrthoFinder output from all 47 species
Ceric.12G021300.1 Ceric.12G021300 not classified & original description: pacid=50600778... 0.03 OrthoFinder output from all 47 species
Ceric.12G036800.1 Ceric.12G036800 not classified & original description: pacid=50601765... 0.02 OrthoFinder output from all 47 species
Ceric.13G001600.1 Ceric.13G001600 not classified & original description: pacid=50636694... 0.02 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.02 OrthoFinder output from all 47 species
Ceric.1Z003200.1 Ceric.1Z003200 not classified & original description: pacid=50628145... 0.03 OrthoFinder output from all 47 species
Ceric.1Z148300.1 Ceric.1Z148300 not classified & original description: pacid=50637132... 0.02 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.01 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.02 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.02 OrthoFinder output from all 47 species
Ceric.23G060300.1 CRR22, Ceric.23G060300 not classified & original description: pacid=50610371... 0.01 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.02 OrthoFinder output from all 47 species
Ceric.27G018200.1 Ceric.27G018200 not classified & original description: pacid=50604999... 0.03 OrthoFinder output from all 47 species
Ceric.30G066500.1 Ceric.30G066500 not classified & original description: pacid=50608384... 0.02 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.02 OrthoFinder output from all 47 species
Ceric.31G032400.1 CRR22, Ceric.31G032400 not classified & original description: pacid=50574168... 0.02 OrthoFinder output from all 47 species
Ceric.33G045700.1 Ceric.33G045700 not classified & original description: pacid=50607261... 0.04 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.02 OrthoFinder output from all 47 species
Ceric.34G039000.1 Ceric.34G039000 not classified & original description: pacid=50623583... 0.03 OrthoFinder output from all 47 species
Ceric.38G003200.1 Ceric.38G003200 not classified & original description: pacid=50580561... 0.03 OrthoFinder output from all 47 species
Ceric.38G024200.1 Ceric.38G024200 not classified & original description: pacid=50580039... 0.02 OrthoFinder output from all 47 species
Ceric.39G045800.1 VAC1, ECB2,... not classified & original description: pacid=50583112... 0.03 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06433 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g21497 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04912 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g08437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27024 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28824 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47657 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Len_g18945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21090 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19898 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24627 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34200 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g42801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48726 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17818 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07300 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02840 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03324 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11413 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12220 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18671 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57543 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63892 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002155 CRR22 not classified & original description: CDS=84-2588 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019337 No alias not classified & original description: CDS=1-3108 0.01 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo101455 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Spa_g15181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54422 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.01 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 20 66
IPR002885 Pentatricopeptide_repeat 122 168
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 96 118
No external refs found!