Tin_g23254


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10827 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16836 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23823 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24375 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32674 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28193 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28404 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.03 OrthoFinder output from all 47 species
Dac_g09118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19096 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36053 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12140 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34514 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g06673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11413 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63892 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22999 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 326
IPR002885 Pentatricopeptide_repeat 200 222
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 124 170
No external refs found!