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  5. Tin_g23262

Tin_g23262


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g040866 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16115 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g21844 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28677 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0070.g036726 REME1 not classified & original description: CDS=1-1386 0.05 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g30435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.03 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g14377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23050 OTP85 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_140591g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_75133g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.08 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.04 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 155 202
IPR002885 Pentatricopeptide_repeat 360 407
IPR002885 Pentatricopeptide_repeat 258 305
No external refs found!