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  5. Tin_g23282

Tin_g23282


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23282

Target Alias Description ECC score Gene Family Method Actions
Adi_g002735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007107 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05831 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55028 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001303 No alias not classified & original description: CDS=1-2292 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.01 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011649 No alias not classified & original description: CDS=1-3195 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025575 CRR2 not classified & original description: CDS=1-1563 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.01 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037861 No alias not classified & original description: CDS=1-1125 0.03 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.03 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Cba_g04086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20672 REME1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29885 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03214 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20094 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06848 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002155 CRR22 not classified & original description: CDS=84-2588 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007299 No alias not classified & original description: CDS=1-3327 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008151 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020410 No alias not classified & original description: CDS=1-2748 0.02 OrthoFinder output from all 47 species
Sam_g02448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g24307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo132819 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g05335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g23121 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 274 321
IPR002885 Pentatricopeptide_repeat 376 422
IPR002885 Pentatricopeptide_repeat 171 218
IPR002885 Pentatricopeptide_repeat 683 728
IPR002885 Pentatricopeptide_repeat 478 524
IPR002885 Pentatricopeptide_repeat 70 116
IPR002885 Pentatricopeptide_repeat 580 626
IPR002885 Pentatricopeptide_repeat 348 373
IPR002885 Pentatricopeptide_repeat 757 780
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 146 169
IPR002885 Pentatricopeptide_repeat 553 577
IPR002885 Pentatricopeptide_repeat 655 681
No external refs found!