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  5. Tin_g24052

Tin_g24052


Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24052

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.02 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.03 OrthoFinder output from all 47 species
AT5G50080 ERF110 ethylene response factor 110 0.03 OrthoFinder output from all 47 species
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.02 OrthoFinder output from all 47 species
Ala_g32688 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16147 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g20815 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Aob_g22222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33297 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10151 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g22445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25155 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37207 DREB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38416 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g39294 tny not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54210.t1 Aspi01Gene54210 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014420 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g12673 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23008 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g39353 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01289 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04602 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g03884 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g22670 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033416001 RAP2.11 External stimuli response.biotic... 0.01 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01035098001 ERF72, EBP, ATEBP, RAP2.3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_26662 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_26738 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_29220 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_29359 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.02 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
LOC_Os02g55380.1 LOC_Os02g55380 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g09170.1 RAP2.4, LOC_Os03g09170 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g55520.1 DEAR3, LOC_Os04g55520 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28440.1 RRTF1, LOC_Os09g28440 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.01 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_2040g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g02590.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g09158 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g18832 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g19552 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40238 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14069 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g16730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20998 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g21132 ORA47 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12089 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g34169 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pir_g37924 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07678 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g24749 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32668 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g33487 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554 tny not classified & original description: CDS=1-1182 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026324 ERF110 not classified & original description: CDS=572-2401 0.03 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g007230.3.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g39600 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Tin_g20867 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023759_P001 Zm00001e023759 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
Zm00001e023804_P001 DREB26, Zm00001e023804 Ethylene-responsive transcription factor ERF013... 0.02 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033072_P001 RAP2.11, Zm00001e033072 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 47 95
No external refs found!