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  5. Tin_g24634

Tin_g24634


Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24634
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT1G70700 JAZ9, TIFY7 TIFY domain/Divergent CCT motif family protein 0.02 OrthoFinder output from all 47 species
Als_g11586 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64521 TIFY11A, JAZ5 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26923.t1 JAI3, JAZ3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0087.g042329 PPD2, TIFY4B TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0155.g053618 JAZ12, TIFY3B TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G034300.1 Ceric.07G034300 not classified & original description: pacid=50627732... 0.03 OrthoFinder output from all 47 species
Dac_g03073 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31015 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g70150.1 LOC_Os01g70150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08310.1 LOC_Os03g08310 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08320.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08330.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
LOC_Os04g55920.1 JAZ12, TIFY3B,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42370.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.04 OrthoFinder output from all 47 species
LOC_Os10g25290.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_10434826g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_131708g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1854g0020 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_469601g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_68496g0010 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8355655g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_8757791g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Pir_g23723 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35243 JAZ4, TIFY6A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g009220.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Solyc12g049400.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
Zm00001e004861_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e009884_P001 TIFY11A, JAZ5,... Protein TIFY 10c OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e012855_P001 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e012856_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Zm00001e034256_P001 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 92 119
IPR018467 CCT_CS 160 178
No external refs found!