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  5. Tin_g24678

Tin_g24678 (UBQ14)


Aliases : UBQ14

Description : UBQ ubiquiTin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24678
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Ala_g09402 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G032100.1 RUB1, ATRUB1,... RUB ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Cre07.g322100 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre11.g467567 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
MA_13121g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp4g02760.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Pp3c19_8830V3.1 UBQ10, Pp3c19_8830 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Pp3c4_11430V3.1 UBQ14, Pp3c4_11430 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Zm00001e021401_P001 UBQ11, Zm00001e021401 Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 185 217
IPR000626 Ubiquitin-like_dom 109 180
IPR000626 Ubiquitin-like_dom 1 28
IPR000626 Ubiquitin-like_dom 33 104
No external refs found!