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  5. Tin_g24899

Tin_g24899


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24899
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT5G22540 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Ala_g12369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G007100.1 Ceric.30G007100 not classified & original description: pacid=50608898... 0.08 OrthoFinder output from all 47 species
Dde_g03345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g48193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20047 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36111 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_37289 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33430.1 LOC_Os11g33430 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g24925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_749769g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g02930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g16570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g07146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26666 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117260.2.1 Solyc03g117260 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g007010.1.1 Solyc07g007010 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e024194_P001 Zm00001e024194 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 51 520
No external refs found!