Tin_g25224 (ABCC12, MRP13, ATMRP13)

Aliases : ABCC12, MRP13, ATMRP13

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g25224

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00226270	MRP6, ATMRP6,...	ABC transporter C family member 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00212850	MRP11, ABCC13,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT3G60160	MRP9, ABCC9, ATMRP9	multidrug resistance-associated protein 9	0.02	OrthoFinder output from all 47 species
Ala_g02697	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g20128	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23759	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene26287.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene64349.t1	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64352.t1	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g06591	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g31869	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.1Z013100.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.23G084100.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g12577	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g23847	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21853	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Len_g22379	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp4g11930.1	ATABCC5, MRP5,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Mp7g13860.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.01	OrthoFinder output from all 47 species
Nbi_g30857	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.08	OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004014	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=118-4101	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014950	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4785	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017297	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: CDS=111-3830	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4845	0.02	OrthoFinder output from all 47 species
Smo409191	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	452	586
IPR003439	ABC_transporter-like_ATP-bd	1115	1264
IPR011527	ABC1_TM_dom	93	347
IPR011527	ABC1_TM_dom	788	1046

External Links

No external refs found!

Tin_g25224 (ABCC12, MRP13, ATMRP13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation