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  5. Tin_g25236

Tin_g25236 (CCR1, IRX4, ATCCR1)


Aliases : CCR1, IRX4, ATCCR1

Description : not classified & original description: none


Gene families : OG0000064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g25236
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00142650 evm_27.TU.AmTr_v1... Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00160780 evm_27.TU.AmTr_v1... Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00153p00069260 evm_27.TU.AmTr_v1... Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT1G09490 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g11759 DFR, TT3, M318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044605 No alias not classified & original description: CDS=118-1080 0.03 OrthoFinder output from all 47 species
Dac_g15231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15232 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g09846 CCR2, ATCCR2 cinnamoyl-CoA reductase *(CCR) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30802 DFR, TT3, M318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027246001 No alias Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os09g31502.1 LOC_Os09g31502 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.09 OrthoFinder output from all 47 species
LOC_Os09g31506.1 LOC_Os09g31506 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os09g31514.1 LOC_Os09g31514 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g13165 CCR1, IRX4, ATCCR1 phaseic acid reductase *(CRL1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40404 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_9446650g0010 CCR1, IRX4, ATCCR1 cinnamoyl-CoA reductase (CCR) 0.02 OrthoFinder output from all 47 species
Mp5g13690.1 No alias Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g07900.1 No alias Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pnu_g10798 DFR, TT3, M318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo227659 CCR1, IRX4, ATCCR1 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc11g072510.3.1 Solyc11g072510 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40823 CCR1, IRX4, ATCCR1 phaseic acid reductase *(CRL1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039945_P001 Zm00001e039945 Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 84 321
No external refs found!