Tin_g26293


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26293
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00220350 OTP85,... Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047336 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18197 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g26256 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55219 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61086 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20865 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07081 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09708 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02996.t1 CRR2, Aspi01Gene02996 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27322.t1 Aspi01Gene27322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30532.t1 Aspi01Gene30532 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37377.t1 Aspi01Gene37377 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61045.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000730 No alias not classified & original description: CDS=1-2529 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024865 No alias not classified & original description: CDS=234-3254 0.03 OrthoFinder output from all 47 species
Cba_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35191 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G003100.1 Ceric.06G003100 not classified & original description: pacid=50620504... 0.04 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.03 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.03 OrthoFinder output from all 47 species
Dac_g17048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08263 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08876 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17095 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22538 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35896 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05943 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g09519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16392 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19440 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25739 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g39573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.06 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
GSVIVT01033872001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Len_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17570 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07422 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57507 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026002 No alias not classified & original description: CDS=74-2389 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107825 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo84746 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g23799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31798 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 302
IPR002885 Pentatricopeptide_repeat 206 232
IPR002885 Pentatricopeptide_repeat 712 741
IPR002885 Pentatricopeptide_repeat 481 506
IPR002885 Pentatricopeptide_repeat 683 705
IPR002885 Pentatricopeptide_repeat 785 805
IPR002885 Pentatricopeptide_repeat 610 638
IPR046848 E_motif 826 888
IPR002885 Pentatricopeptide_repeat 507 554
IPR002885 Pentatricopeptide_repeat 406 453
IPR046849 Eplus_motif 893 918
IPR002885 Pentatricopeptide_repeat 330 388
IPR032867 DYW_dom 924 1014
No external refs found!