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  5. Tin_g26623

Tin_g26623


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26623

Target Alias Description ECC score Gene Family Method Actions
Aev_g13039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33015 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23036 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28912 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03866 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07097 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17740 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g22913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39284 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19712 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g26166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0070469 respirasome IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 305 328
IPR002885 Pentatricopeptide_repeat 102 120
IPR002885 Pentatricopeptide_repeat 435 449
IPR002885 Pentatricopeptide_repeat 407 431
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 127 173
IPR002885 Pentatricopeptide_repeat 330 377
No external refs found!