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  5. Tin_g26638

Tin_g26638 (OTP84)


Aliases : OTP84

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26638

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022409 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015998 OTP84 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Cba_g67737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68945 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015087001 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.04 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.03 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14701 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_370961g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011528 EMB2758 non-specific cation channel *(PQL1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g20190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 197
IPR002885 Pentatricopeptide_repeat 353 400
IPR002885 Pentatricopeptide_repeat 251 298
IPR002885 Pentatricopeptide_repeat 456 503
IPR032867 DYW_dom 672 764
IPR002885 Pentatricopeptide_repeat 530 557
IPR002885 Pentatricopeptide_repeat 328 352
No external refs found!