Tin_g26871


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26871
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.01 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058825 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27290 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g32690 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37584 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68117 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69046 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene01267.t1 CRR2, Aspi01Gene01267 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02341.t1 Aspi01Gene02341 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03711.t1 Aspi01Gene03711 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10264.t1 Aspi01Gene10264 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14355.t1 Aspi01Gene14355 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15988.t1 Aspi01Gene15988 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23907.t1 Aspi01Gene23907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33092.t1 Aspi01Gene33092 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.06 OrthoFinder output from all 47 species
Cba_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26054 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G010800.1 Ceric.13G010800 not classified & original description: pacid=50634967... 0.04 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.11 OrthoFinder output from all 47 species
Ceric.25G070400.1 Ceric.25G070400 not classified & original description: pacid=50594567... 0.02 OrthoFinder output from all 47 species
Ceric.29G024800.1 Ceric.29G024800 not classified & original description: pacid=50625545... 0.06 OrthoFinder output from all 47 species
Dac_g09594 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g09764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29379 OTP85 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g38994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07052 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g02904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g03849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18055 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21003 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22535 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26579 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g32892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44147 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g44151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06935 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07433 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g37667 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38587 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26486 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06311 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15547 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g25097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g33710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02784 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16135 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g22120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25064 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06822 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06906 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008668 No alias not classified & original description: CDS=1-2001 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023237 No alias not classified & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo105033 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Smo106096 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Smo107109 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo107192 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo116842 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo132724 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Smo134551 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.01 OrthoFinder output from all 47 species
Smo135822 CRR2 Pentatricopeptide repeat-containing protein At3g09040,... 0.01 OrthoFinder output from all 47 species
Smo136851 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo138241 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Smo51647 EMB2758 Pentatricopeptide repeat-containing protein At1g15510,... 0.01 OrthoFinder output from all 47 species
Smo93575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo95871 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.02 OrthoFinder output from all 47 species
Smo97343 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.01 OrthoFinder output from all 47 species
Smo99993 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23159 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 220
IPR002885 Pentatricopeptide_repeat 275 322
IPR002885 Pentatricopeptide_repeat 71 118
No external refs found!