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  5. Tin_g26920

Tin_g26920


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26920
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00048210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00172960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G16750 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT2G39690 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66708.t1 Aspi01Gene66708 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.03 OrthoFinder output from all 47 species
Ceric.14G094300.1 Ceric.14G094300 not classified & original description: pacid=50633652... 0.04 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001955001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01004717001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03140.1 LOC_Os07g03140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g13540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo424121 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo74798 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g079340.3.1 Solyc04g079340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032746_P001 Zm00001e032746 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034388_P001 Zm00001e034388 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 402 536
IPR025757 MIP1_Leuzipper 86 152
No external refs found!