Tin_g27046


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27046

Target Alias Description ECC score Gene Family Method Actions
Adi_g002514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02312.t1 Aspi01Gene02312 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03412.t1 Aspi01Gene03412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51368.t2 CRR22, Aspi01Gene51368 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61170.t1 OTP84, Aspi01Gene61170 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61944.t1 OSB3, Aspi01Gene61944 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68665.t1 CRR22, Aspi01Gene68665 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene69211.t1 Aspi01Gene69211 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s4317.g118723 No alias ssDNA-binding protein *(OSB) & original description: CDS=173-1369 0.1 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g05286 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27524 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16522 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04288 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04340 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g04454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31919 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g27459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43951 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06094 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g03231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000158 No alias not classified & original description: CDS=1-2931 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004580 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011528 EMB2758 non-specific cation channel *(PQL1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018425 No alias not classified & original description: CDS=1-2226 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.04 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 83 136
IPR002885 Pentatricopeptide_repeat 1 24
IPR002885 Pentatricopeptide_repeat 31 62
No external refs found!