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  5. Tin_g27147

Tin_g27147


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27147
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT4G31070 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G13230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g034887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43139 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25462 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.01 OrthoFinder output from all 47 species
Ceric.28G057800.1 REME1, Ceric.28G057800 not classified & original description: pacid=50570331... 0.01 OrthoFinder output from all 47 species
Ceric.29G017900.1 Ceric.29G017900 not classified & original description: pacid=50624370... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g37317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36053 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018877001 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.01 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g17928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07802 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07807 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g35356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02840 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12220 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13533 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57072 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009016 No alias not classified & original description: CDS=1-2955 0.02 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25577 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016281_P001 LPA66, Zm00001e016281 Pentatricopeptide repeat-containing protein At3g62890... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 2 41
IPR002885 Pentatricopeptide_repeat 195 242
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 171 192
IPR002885 Pentatricopeptide_repeat 69 92
No external refs found!