1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g27795

Tin_g27795


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27795

Target Alias Description ECC score Gene Family Method Actions
Adi_g007707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G043400.1 Ceric.12G043400 not classified & original description: pacid=50601666... 0.05 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10600g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo413714 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 139 203
IPR000504 RRM_dom 259 326
No external refs found!