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  5. Tin_g27808

Tin_g27808 (GR-RBP4, GRP4)


Aliases : GR-RBP4, GRP4

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27808

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.05 OrthoFinder output from all 47 species
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G74230 GR-RBP5 glycine-rich RNA-binding protein 5 0.02 OrthoFinder output from all 47 species
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 OrthoFinder output from all 47 species
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.06 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.02 OrthoFinder output from all 47 species
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.04 OrthoFinder output from all 47 species
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016091 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040241 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043489 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111293 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24232 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00926 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52246.t1 Aspi01Gene52246 RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009790 CCR2, ATGRP7,... not classified & original description: CDS=136-657 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011258 CCR2, ATGRP7,... not classified & original description: CDS=99-740 0.04 OrthoFinder output from all 47 species
Azfi_s0062.g035257 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=192-584 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046316 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: CDS=161-592 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065814 GR-RBP3 not classified & original description: CDS=194-694 0.05 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.04 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14006 ATRZ-1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44420 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G037800.1 GR-RBP4, GRP4,... not classified & original description: pacid=50619932... 0.04 OrthoFinder output from all 47 species
Ceric.09G066000.1 Ceric.09G066000 RNA chaperone *(RZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G066700.1 GRP2, ATGRP2,... not classified & original description: pacid=50597731... 0.03 OrthoFinder output from all 47 species
Cre02.g079400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09825 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33383 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12830 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021024001 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04440.1 LOC_Os08g04440 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.07 OrthoFinder output from all 47 species
MA_77292g0010 No alias RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05645 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26664 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32937 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44021 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07983 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19209 CCR1, GR-RBP8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.03 OrthoFinder output from all 47 species
Ppi_g50550 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000635 GR-RBP3 RNA editing factor *(ORRM3) & original description: CDS=202-855 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021985 GR-RBP3 not classified & original description: CDS=185-544 0.03 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo406315 GR-RBP4, GRP4 Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 OrthoFinder output from all 47 species
Solyc02g088790.3.1 GR-RBP3, Solyc02g088790 RNA editing factor (ORRM) 0.05 OrthoFinder output from all 47 species
Solyc10g081180.2.1 GR-RBP3, Solyc10g081180 RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.05 OrthoFinder output from all 47 species
Spa_g10567 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20439 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30378 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011440_P001 Zm00001e011440 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Zm00001e012278_P001 Zm00001e012278 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.07 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035491_P001 GR-RBP5, Zm00001e035491 RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 88 158
No external refs found!