1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g28428

Tin_g28428 (ATMYC2, MYC2,...)


Aliases : ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g28428
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g079557 AIB, ATAIB bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03934 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01870 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15590 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29175 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30820 ATMYC2, MYC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31841 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38152 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g19244 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22120 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29942 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037659 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2847 0.04 OrthoFinder output from all 47 species
Ceric.05G025500.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.13G040400.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G060700.1 Ceric.15G060700 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G017000.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G048200.1 Ceric.33G048200 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G007700.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g16021 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13918 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15124 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013156001 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_17737 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_32265 BHLH42, TT8 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47080.1 EGL1, EGL3,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Lfl_g04153 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30934 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19111 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03200 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13494 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05785 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00636 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42582 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02577 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13054 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31960 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05334 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007871 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013150 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013863 No alias bHLH-type transcription factor & original description: CDS=1-1902 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021673 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-3147 0.03 OrthoFinder output from all 47 species
Solyc06g083980.3.1 Solyc06g083980 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g06271 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22636 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26910 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45421 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003740_P001 Zm00001e003740 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e020021_P001 AIB, ATAIB,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e041498_P001 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 653 698
IPR025610 MYC/MYB_N 80 267
No external refs found!