Aliases : TRX P, TRX z
Description : cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ) & original description: none
Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g28767 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06730 | TRX P, TRX z | Thioredoxin z | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013779 | TRX P, TRX z | cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g00464 | TRX P, TRX z | cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g29110.1 | TRX P, TRX z,... | Z-type thioredoxin. PAP10/TrxZ cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04907 | TRX P, TRX z | cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004249_P001 | TRX P, TRX z,... | Z-type thioredoxin. PAP10/TrxZ cofactor of... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 75 | 168 |
| No external refs found! |
