Aliases : CRR2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g28830 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24343 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g36217 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g58106 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04243 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20910 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23786 | MEF19 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29297 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene12658.t1 | Aspi01Gene12658 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71861.t1 | CRR2, Aspi01Gene71861 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11093 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g33383 | CRR22 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.01G084700.1 | VAC1, ECB2,... | not classified & original description: pacid=50592179... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G103900.1 | Ceric.04G103900 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G007000.1 | Ceric.10G007000 | not classified & original description: pacid=50613077... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G031500.1 | OTP84, Ceric.10G031500 | not classified & original description: pacid=50611993... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G060300.1 | CRR22, Ceric.23G060300 | not classified & original description: pacid=50610371... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G067100.1 | CRR22, Ceric.27G067100 | not classified & original description: pacid=50605115... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G017900.1 | Ceric.29G017900 | not classified & original description: pacid=50624370... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G066500.1 | Ceric.30G066500 | not classified & original description: pacid=50608384... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.31G032400.1 | CRR22, Ceric.31G032400 | not classified & original description: pacid=50574168... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G039000.1 | Ceric.34G039000 | not classified & original description: pacid=50623583... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18761 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21258 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g29379 | OTP85 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g38506 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43653 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11166 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g26408 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g43239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45907 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g47860 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03965 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g39055 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_03578 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g05629 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18616 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g29257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32452 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41395 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g08923 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09916 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g15736 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g01983 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12230 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13006 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13050 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19423 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g66518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15472 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004580 | No alias | not classified & original description: CDS=1-2331 | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006283 | OTP82 | not classified & original description: CDS=1-1473 | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013095 | No alias | not classified & original description: CDS=481-975 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018249 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=114-2492 | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019337 | No alias | not classified & original description: CDS=1-3108 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02212 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14281 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23159 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g28125 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g51828 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g17624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000301_P001 | Zm00001e000301 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016542_P001 | Zm00001e016542 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026664_P002 | Zm00001e026664 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| No external refs found! |
