Tin_g30002


Description : not classified & original description: none


Gene families : OG0000388 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000388_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30002

Target Alias Description ECC score Gene Family Method Actions
Aop_g07284 ATLIP1, LIP1 triacylglycerol lipase *(LIP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0264.g060884 ATLIP1, LIP1 triacylglycerol lipase *(LIP) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G073400.1 ATLIP1, LIP1,... triacylglycerol lipase *(LIP) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.27 MPL1 Lipid metabolism.lipid degradation.triacylglycerol... 0.03 OrthoFinder output from all 47 species
Gb_11907 MPL1 lipase (LIP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g21160.1 MPL1, LOC_Os04g21160 lipase (LIP) 0.02 OrthoFinder output from all 47 species
Mp1g15860.1 ATLIP1, LIP1 lipase (LIP) 0.02 OrthoFinder output from all 47 species
Nbi_g04734 ATLIP1, LIP1 triacylglycerol lipase *(LIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01999 ATLIP1, LIP1 triacylglycerol lipase *(LIP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51704 No alias triacylglycerol lipase *(LIP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo110855 ATLIP1, LIP1 Lipid metabolism.lipid degradation.triacylglycerol... 0.03 OrthoFinder output from all 47 species
Smo176403 ATLIP1, LIP1 Lipid metabolism.lipid degradation.triacylglycerol... 0.03 OrthoFinder output from all 47 species
Smo177317 MPL1 Lipid metabolism.lipid degradation.triacylglycerol... 0.03 OrthoFinder output from all 47 species
Zm00001e030485_P002 MPL1, Zm00001e030485 lipase (LIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!