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  5. Tin_g30254

Tin_g30254


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30254

Target Alias Description ECC score Gene Family Method Actions
Aev_g34933 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0383.g067429 No alias not classified & original description: CDS=1-1644 0.05 OrthoFinder output from all 47 species
Cba_g29502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
LOC_Os06g02200.1 CRR22, LOC_Os06g02200 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
LOC_Os07g44170.1 EMB2758, LOC_Os07g44170 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g18756 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63456 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 432 478
IPR002885 Pentatricopeptide_repeat 126 172
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 227 274
IPR002885 Pentatricopeptide_repeat 406 428
IPR002885 Pentatricopeptide_repeat 506 524
No external refs found!