1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g31282

Tin_g31282 (WIN1, SHN1)


Aliases : WIN1, SHN1

Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g31282

Target Alias Description ECC score Gene Family Method Actions
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene00047.t1 TINY2, Aspi01Gene00047 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Cba_g13419 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27846 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Ehy_g03378 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ehy_g11454 ERF-1, ATERF-1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.02 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.09 OrthoFinder output from all 47 species
Gb_07476 ERF-6-6, ERF6, ATERF6 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Msp_g25672 DREB26 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g02477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10297 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32986 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42309 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Pnu_g12819 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g21493 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 54
No external refs found!