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  5. Tin_g31947

Tin_g31947


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g31947
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01829.t1 Aspi01Gene01829 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41238.t1 Aspi01Gene41238 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48921.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71848.t2 Aspi01Gene71848 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13171 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31300 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
MA_934266g0010 PTL transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g59710 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13076 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo24518 AT-GT2, GT2 RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e012540_P001 Zm00001e012540 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 469 556
IPR044822 Myb_DNA-bind_4 180 245
No external refs found!